Sequence Similarity Clusters for the Entities in PDB 1MZN

Entity #1 | Chains: A,C,E,G
RXR retinoid X receptor protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 59 259
95 % 5 63 344 Flexibility: Medium
Max RMSD: 13.2, Avg RMSD: 4.4
PDBFlex
90 % 5 65 356
70 % 5 81 294
50 % 5 81 341
40 % 7 94 284
30 % 148 992 10
Entity #2 | Chains: B,D,F,H
Nuclear receptor coactivator 2 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5MKU 1 A Retinoic acid receptor RXR-alpha 9606
2 2P1T 1 A Retinoic acid receptor RXR-alpha ligand binding domain (residues 223-462) 9606
3 4ZSH 1 A Retinoic acid receptor RXR-alpha Ligand binding domain residues 223 - 462 9606
4 3E94 1 A Retinoic acid receptor RXR-alpha ligand binding domain (UNP residues 223-462) 9606
5 1MZN 1 A, C, E, G RXR retinoid X receptor ligand binding domain(residues 223-462) 9606
6 5MJ5 1 A Retinoic acid receptor RXR-alpha 9606
7 5MK4 1 A, C Retinoic acid receptor RXR-alpha UNP residues 229-457 9606
8 1MV9 1 A RXR retinoid X receptor ligand binding domain(residues 223-462) 9606
9 1MVC 1 A RXR retinoid X receptor ligand binding domain(residues 223-462) 9606
10 4RMD 1 A Retinoic acid receptor RXR-alpha ligand binding domain 228-458 9606
11 4N8R 1 A, B, C, D Retinoic acid receptor RXR-alpha ligand binding domain (UNP residues 223-462) 9606
12 3PCU 1 A Retinoic acid receptor RXR-alpha UNP residues 229-458 9606
13 3FUG 1 A Retinoic acid receptor RXR-alpha LIGAND BINDING DOMAIN (RESIDUES 223-462) 9606
14 4PP5 1 A Retinoic acid receptor RXR-alpha Ligand Binding Domain, UNP residues 228-458 9606
15 3OAP 1 A Retinoic acid receptor RXR-alpha hRXRalpha-LBD, UNP residues 228-458 9606
16 3FC6 1 A, C Retinoic acid receptor RXR-alpha 9606
17 4POJ 1 A Retinoic acid receptor RXR-alpha Ligand Binding Domain, UNP residues 228-458 9606
18 4N5G 1 A, B, C, D Retinoic acid receptor RXR-alpha ligand binding domain (UNP residues 223-462) 9606
19 1G5Y 1 A, B, C, D RETINOIC ACID RECEPTOR RXR-ALPHA LIGAND BINDING DOMAIN (RESIDUES 225 - 462) 9606
20 4PP3 1 A Retinoic acid receptor RXR-alpha Ligand Binding Domain, UNP residues 228-458 9606
21 4K4J 1 A Retinoic acid receptor RXR-alpha ligand binding domain, UNP residues 228-458 9606
22 2P1V 1 A Retinoic acid receptor RXR-alpha ligand binding domain (residues 223-462) 9606
23 2P1U 1 A Retinoic acid receptor RXR-alpha ligand binding domain (residues 223-462) 9606
24 3KWY 1 A Retinoic acid receptor RXR-alpha ligand binding domain 9606
25 5LYQ 1 A Retinoic acid receptor RXR-alpha UNP residues 223-462 9606
26 1FM9 1 A RETINOIC ACID RECEPTOR RXR-ALPHA LIGAND BINDING DOMAIN - RESIDUES 225 - 462 9606
27 3OZJ 1 A, C Retinoic acid receptor RXR-alpha ligand-binding domain, UNP residues 225-462 9606
28 4K6I 1 A Retinoic acid receptor RXR-alpha ligand binding domain, UNP residues 228-458 9606
29 4M8H 1 A Retinoic acid receptor RXR-alpha HRXRALPHA-LBD, UNP RESIDUES 228-458 9606
30 1FM6 1 A, U RETINOIC ACID RECEPTOR RXR-ALPHA LIGAND BINDING DOMAIN - RESIDUES 225 -462 9606
31 3H0A 1 A Retinoic acid receptor RXR-alpha UNP RESIDUES 228-455 9606
32 4RME 1 A Retinoic acid receptor RXR-alpha ligand binding domain 228-458 9606
33 4POH 1 A Retinoic acid receptor RXR-alpha Ligand Binding Domain, UNP residues 228-458 9606
34 1FBY 1 A, B RETINOIC ACID RECEPTOR RXR-ALPHA LIGAND BINDING DOMAIN 9606
35 4M8E 1 A Retinoic acid receptor RXR-alpha HRXRALPHA-LBD, UNP RESIDUES 228-458 9606
36 4RFW 1 A Retinoic acid receptor RXR-alpha ligand binding domain residues 228-458 9606
37 1XVP 1 A, C Retinoic acid receptor RXR-alpha LBD domain 9606
38 5MKJ 1 A Retinoic acid receptor RXR-alpha 9606
39 3FAL 1 A, C Retinoic acid receptor RXR-alpha residues 225-462 9606
40 4OC7 1 A Retinoic acid receptor RXR-alpha ligand binding domain (UNP residues 223-462) 9606
41 1K74 1 A Retinoic acid receptor RXR-alpha ligand binding domain - residues 225 - 462 9606
42 1RDT 1 A Retinoic acid receptor RXR-alpha ligand binding doamin 9606
43 1XV9 1 A, C Retinoic acid receptor RXR-alpha LBD domain 9606
44 5TBP 1 A, B, C, D Retinoic acid receptor RXR-alpha UNP residues 223-462 9606
45 4RMC 1 A Retinoic acid receptor RXR-alpha ligand binding domain 228-458 9606
46 1G1U 1 A, B, C, D RETINOIC ACID RECEPTOR RXR-ALPHA LIGAND BINDING DOMAIN (RESIDUES 225 - 462) 9606
47 5MMW 1 A Retinoic acid receptor RXR-alpha 9606
48 2ACL 1 A, C, E, G Retinoic acid receptor RXR-alpha 9606
49 3UVV 2 B Retinoic acid receptor RXR-alpha ligand binding domain (UNP Residues 225-462) 9606
50 2ZY0 1 A, C Retinoic acid receptor RXR-alpha Ligand Binding Domain 9606
51 2ZXZ 1 A Retinoic acid receptor RXR-alpha Ligand Binding Domain 9606
52 3NSQ 1 A, B Retinoid X receptor, alpha ligand binding domain 9606
53 3NSP 1 A, B Retinoid X receptor, alpha ligand binding domain 9606
54 3R5M 1 A, C Retinoic acid receptor RXR-alpha ligand binding domain (UNP residues 223-462) 9606
55 3R29 1 A, B Retinoic acid receptor RXR-alpha ligand binding domain (UNP residues 223-462) 9606
56 1XLS 1 A, B, C, D Retinoic acid receptor RXR-alpha CAR LBD 9606
57 3R2A 1 A, B, C, D Retinoic acid receptor RXR-alpha ligand binding domain (UNP residues 223-462) 9606
58 5GYM 1 A, B, C, D, E, F, G, H Retinoic acid receptor RXR-alpha UNP RESIDUES 227-462 9606
59 4ZO1 3 B Retinoic acid receptor RXR-alpha ligand binding domain, unp residues 231-455 9606