Sequence Similarity Clusters for the Entities in PDB 1MZN

Entity #1 | Chains: A,C,E,G
RXR retinoid X receptor protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 59 258
95 % 5 63 342 Flexibility: Medium
Max RMSD: 13.2, Avg RMSD: 4.4
PDBFlex
90 % 5 65 355
70 % 5 81 290
50 % 5 81 325
40 % 7 94 283
30 % 148 992 10
Entity #2 | Chains: B,D,F,H
Nuclear receptor coactivator 2 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.