Sequence Similarity Clusters for the Entities in PDB 1MZC

Entity #1 | Chains: A
Protein Farnesyltransferase alpha Subunit protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 14 4592
95 % 9 14 4898 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.2
PDBFlex
90 % 12 56 417
70 % 12 56 456
50 % 12 56 514
40 % 12 56 560
30 % 12 56 565
Entity #2 | Chains: B
Protein Farnesyltransferase beta Subunit protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 12 5276
95 % 12 56 956 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 12 56 983
70 % 12 56 1018
50 % 12 56 1064
40 % 12 56 1074
30 % 12 56 1078

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures