Sequence Similarity Clusters for the Entities in PDB 1MZ8

Entity #1 | Chains: A,C
Colicin E7 immunity protein protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 3567
95 % 4 11 3724 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 4 11 3777
70 % 4 12 3441
50 % 19 39 988
40 % 19 39 1014
30 % 19 39 996
Entity #2 | Chains: B,D
Colicin E7 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 13985
95 % 2 15 2415 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 2 15 2481
70 % 17 35 981
50 % 19 38 861
40 % 19 38 894
30 % 19 38 878

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures