Sequence Similarity Clusters for the Entities in PDB 1MYP

Entity #1 | Chains: A,B
MYELOPEROXIDASE protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 15 1178
95 % 14 15 1583 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 14 15 1612
70 % 14 15 1625
50 % 14 15 1663
40 % 14 15 1678
30 % 14 15 1638
Entity #2 | Chains: C,D
MYELOPEROXIDASE protein, length: 466 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 15 1152
95 % 14 15 1552 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 14 15 1583
70 % 14 15 1587
50 % 14 15 1630
40 % 14 15 1648
30 % 14 15 1615

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.