Sequence Similarity Clusters for the Entities in PDB 1MY7

Entity #1 | Chains: A,B
NF-kappaB p65 (RelA) subunit protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45314
95 % 1 2 19752 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 1 2 19209
70 % 1 2 17709
50 % 1 24 1339
40 % 1 24 1347
30 % 1 24 1330

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.