Sequence Similarity Clusters for the Entities in PDB 1MXE

Entity #1 | Chains: A,B
Calmodulin protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 13 3029
95 % 21 187 82 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 27 200 81
70 % 28 202 96
50 % 28 235 105
40 % 29 358 41
30 % 30 385 50
Entity #2 | Chains: E,F
Target Sequence of rat Calmodulin-Dependent Protein Kinase I protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51117
95 % 1 1 38206 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 36450
70 % 1 1 32401
50 % 1 1 27701
40 % 1 1 24508
30 % 1 1 20861

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures