Sequence Similarity Clusters for the Entities in PDB 1MXE

Entity #1 | Chains: A,B
Calmodulin protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 13 2800
95 % 18 165 93 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 24 178 81
70 % 25 180 98
50 % 25 213 112
40 % 26 336 33
30 % 27 363 47
Entity #2 | Chains: E,F
Target Sequence of rat Calmodulin-Dependent Protein Kinase I protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48109
95 % 1 1 36020 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 34432
70 % 1 1 30735
50 % 1 1 26355
40 % 1 1 23321
30 % 1 1 19852

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.