Sequence Similarity Clusters for the Entities in PDB 1MXE

Entity #1 | Chains: A,B
Calmodulin protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 13 2991
95 % 20 178 90 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 26 191 87
70 % 27 193 103
50 % 27 226 112
40 % 28 349 43
30 % 29 376 51
Entity #2 | Chains: E,F
Target Sequence of rat Calmodulin-Dependent Protein Kinase I protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50479
95 % 1 1 37737 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 36012
70 % 1 1 32023
50 % 1 1 27394
40 % 1 1 24231
30 % 1 1 20628

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures