Sequence Similarity Clusters for the Entities in PDB 1MXD

Entity #1 | Chains: A
alpha amylase protein, length: 435 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 25562
95 % 2 3 21685 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 3 21074
70 % 2 4 14718
50 % 2 4 12984
40 % 2 4 11739
30 % 17 28 1942

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.