Sequence Similarity Clusters for the Entities in PDB 1MXD

Entity #1 | Chains: A
alpha amylase protein, length: 435 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 25975
95 % 2 3 22006 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 3 21371
70 % 2 4 14956
50 % 2 4 13183
40 % 2 4 11912
30 % 17 28 1974

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures