Sequence Similarity Clusters for the Entities in PDB 1MWP

Entity #1 | Chains: A
AMYLOID A4 PROTEIN protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 37871
95 % 2 2 30425 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 2 2 29165
70 % 2 2 26166
50 % 2 2 22433
40 % 2 2 19779
30 % 2 2 16565

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4PQD 1 A Amyloid beta A4 protein the N-terminal GFLD doamin of APP, UNP residues 22-126 9606
2 1MWP 1 A AMYLOID A4 PROTEIN HEPARIN BINDING DOMAIN 9606