Sequence Similarity Clusters for the Entities in PDB 1MWA

Entity #1 | Chains: A,C
2C T CELL RECEPTOR ALPHA CHAIN protein, length: 202 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 9733
95 % 2 4 9735
90 % 2 4 9622
70 % 16 25 1213
50 % 192 275 81
40 % 192 275 100
30 % 3591 4972 1
Entity #2 | Chains: B,D
2C T CELL RECEPTOR BETA CHAIN protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 9630
95 % 6 11 2892
90 % 9 16 1761
70 % 202 285 43
50 % 202 288 75
40 % 202 288 93
30 % 3592 4972 1
Entity #3 | Chains: H,I
H-2KBM3 MHC CLASS I MOLECULE HEAVY CHAIN protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24804
95 % 56 65 331
90 % 60 70 332
70 % 583 644 7
50 % 585 649 7
40 % 618 691 11
30 % 692 807 14
Entity #4 | Chains: L,M
MICROGLOBULIN MHC LIGHT CHAIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 112 131 92
95 % 169 212 65
90 % 169 212 69
70 % 728 837 5
50 % 741 857 5
40 % 741 857 9
30 % 741 857 13
Entity #5 | Chains: P,Q
DEV8 protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.