Sequence Similarity Clusters for the Entities in PDB 1MWA

Entity #1 | Chains: A,C
2C T CELL RECEPTOR ALPHA CHAIN protein, length: 202 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 9948
95 % 2 4 9956
90 % 2 4 9829
70 % 16 25 1244
50 % 201 285 82
40 % 201 285 101
30 % 3725 5151 1
Entity #2 | Chains: B,D
2C T CELL RECEPTOR BETA CHAIN protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 9843
95 % 6 11 2956
90 % 9 16 1832
70 % 211 295 43
50 % 211 298 75
40 % 211 298 92
30 % 3726 5151 1
Entity #3 | Chains: H,I
H-2KBM3 MHC CLASS I MOLECULE HEAVY CHAIN protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 25392
95 % 56 65 344
90 % 60 70 349
70 % 602 664 7
50 % 604 669 7
40 % 643 717 10
30 % 717 834 15
Entity #4 | Chains: L,M
MICROGLOBULIN MHC LIGHT CHAIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 112 131 95
95 % 170 213 66
90 % 170 213 70
70 % 749 859 5
50 % 762 879 5
40 % 762 879 9
30 % 762 879 14
Entity #5 | Chains: P,Q
DEV8 protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.