Sequence Similarity Clusters for the Entities in PDB 1MWA

Entity #1 | Chains: A,C
2C T CELL RECEPTOR ALPHA CHAIN protein, length: 202 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 9609
95 % 2 4 9630
90 % 2 4 9515
70 % 16 25 1197
50 % 191 274 81
40 % 191 274 100
30 % 3546 4901 1
Entity #2 | Chains: B,D
2C T CELL RECEPTOR BETA CHAIN protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 9507
95 % 6 11 2851
90 % 9 16 1737
70 % 201 284 42
50 % 201 287 74
40 % 201 287 89
30 % 3547 4901 1
Entity #3 | Chains: H,I
H-2KBM3 MHC CLASS I MOLECULE HEAVY CHAIN protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24493
95 % 56 65 328
90 % 60 70 328
70 % 569 630 7
50 % 571 635 7
40 % 604 677 11
30 % 678 793 14
Entity #4 | Chains: L,M
MICROGLOBULIN MHC LIGHT CHAIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 112 131 90
95 % 169 212 65
90 % 169 212 69
70 % 714 823 5
50 % 727 843 5
40 % 727 843 9
30 % 727 843 12
Entity #5 | Chains: P,Q
DEV8 protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.