Sequence Similarity Clusters for the Entities in PDB 1MVW

Entity #1 | Chains: A,D,G,J,M,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 12 709
95 % 14 15 834
90 % 14 15 862
70 % 18 19 797
50 % 87 91 350
40 % 107 111 274
30 % 131 135 236
Entity #2 | Chains: B,E,H,K,N,Q
SKELETAL MUSCLE MYOSIN II REGULATORY; LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 11 758
95 % 13 14 859
90 % 13 14 890
70 % 15 16 878
50 % 45 47 539
40 % 342 361 40
30 % 409 432 42
Entity #3 | Chains: C,F,I,L,O,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL; LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 12 737
95 % 14 15 848
90 % 14 15 880
70 % 23 25 652
50 % 23 25 701
40 % 343 361 40
30 % 410 432 42
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
RABBIT SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 143 144 9
95 % 198 199 9
90 % 204 205 10
70 % 209 210 13
50 % 216 217 15
40 % 235 236 25
30 % 255 256 39

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures