Sequence Similarity Clusters for the Entities in PDB 1MVW

Entity #1 | Chains: A,D,G,J,M,P
SKELETAL MUSCLE MYOSIN II protein, length: 840 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 12 572
95 % 14 15 751
90 % 14 15 777
70 % 16 17 767
50 % 47 48 436
40 % 97 101 275
30 % 122 126 229
Entity #2 | Chains: B,E,H,K,N,Q
SKELETAL MUSCLE MYOSIN II REGULATORY; LIGHT CHAIN protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 11 620
95 % 13 14 786
90 % 13 14 817
70 % 14 15 847
50 % 43 44 515
40 % 311 329 32
30 % 339 358 47
Entity #3 | Chains: C,F,I,L,O,R
SKELETAL MUSCLE MYOSIN II ESSENTIAL; LIGHT CHAIN protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 12 608
95 % 14 15 775
90 % 14 15 803
70 % 23 25 576
50 % 23 25 619
40 % 312 329 32
30 % 340 358 47
Entity #4 | Chains: 1,2,3,4,5,6,7,8,9,V,W,X,Y,Z
RABBIT SKELETAL MUSCLE ACTIN protein, length: 375 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 122 123 22
95 % 173 174 15
90 % 178 179 16
70 % 181 182 25
50 % 183 184 38
40 % 202 203 42
30 % 222 223 53

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.