Sequence Similarity Clusters for the Entities in PDB 1MVM

Entity #1 | Chains: A
PROTEIN (MURINE MINUTE VIRUS COAT PROTEIN) protein, length: 587 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 29412
95 % 4 4 14548
90 % 4 4 14280
70 % 4 4 13407
50 % 17 18 1136
40 % 17 18 1147
30 % 17 18 1122
Entity #2 | Chains: B
DNA (5'-D(*CP*CP*AP*CP*CP*CP*CP*AP*AP*CP*A)-3') dna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
DNA (5'-D(*CP*AP*AP*A)-3') dna, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
DNA (5'-D(*A)-3') dna, length: 1 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.