Sequence Similarity Clusters for the Entities in PDB 1MVF

Entity #1 | Chains: A,B
immunoglobulin heavy chain variable region protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43992
95 % 1 1 33064 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 31622
70 % 69 350 9
50 % 87 540 8
40 % 136 887 5
30 % 150 1013 7
Entity #2 | Chains: D,E
PemI-like protein 1 protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28996
95 % 1 2 24011 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 1 2 23247
70 % 1 2 21242
50 % 1 2 18412
40 % 1 2 16405
30 % 1 2 14054

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.