Sequence Similarity Clusters for the Entities in PDB 1MVF

Entity #1 | Chains: A,B
immunoglobulin heavy chain variable region protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44644
95 % 1 1 33559 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 32081
70 % 73 372 9
50 % 93 566 7
40 % 142 916 5
30 % 156 1042 7
Entity #2 | Chains: D,E
PemI-like protein 1 protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29531
95 % 1 2 24480 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 1 2 23689
70 % 1 2 21563
50 % 1 2 18660
40 % 1 2 16622
30 % 1 2 14238

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.