Sequence Similarity Clusters for the Entities in PDB 1MVC

Entity #1 | Chains: A
RXR retinoid X receptor protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 59 259
95 % 9 63 344 Flexibility: Medium
Max RMSD: 13.2, Avg RMSD: 4.4
PDBFlex
90 % 9 65 356
70 % 9 81 294
50 % 9 81 341
40 % 11 94 284
30 % 172 992 10
Entity #2 | Chains: B
Nuclear receptor coactivator 2 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures