Sequence Similarity Clusters for the Entities in PDB 1MVC

Entity #1 | Chains: A
RXR retinoid X receptor protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 53 289
95 % 6 57 373 Flexibility: Medium
Max RMSD: 13.2, Avg RMSD: 4.3
PDBFlex
90 % 6 58 396
70 % 6 75 302
50 % 6 75 357
40 % 8 88 302
30 % 167 979 9
Entity #2 | Chains: B
Nuclear receptor coactivator 2 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.