Sequence Similarity Clusters for the Entities in PDB 1MVB

Entity #1 | Chains: A,B,C
BACTERIOPHAGE MS2 CAPSID protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 13200
95 % 18 37 82 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.7
PDBFlex
90 % 18 37 87
70 % 18 39 100
50 % 18 41 112
40 % 18 41 136
30 % 18 41 144

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.