Sequence Similarity Clusters for the Entities in PDB 1MUJ

Entity #1 | Chains: A
H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, A-B ALPHA CHAIN protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 9 3338
95 % 3 16 2300
90 % 3 23 1449
70 % 8 44 741
50 % 34 149 176
40 % 34 149 189
30 % 67 310 94
Entity #2 | Chains: B
H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, A BETA CHAIN protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60910
95 % 1 1 42504
90 % 2 14 3545
70 % 33 140 161
50 % 34 149 175
40 % 34 149 188
30 % 68 310 94
Entity #3 | Chains: C
CLIP peptide protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73058
95 % 1 1 50913
90 % 1 1 48340
70 % 1 1 42407
50 % 1 1 36204
40 % 1 1 31896
30 % 1 1 27008

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.