Sequence Similarity Clusters for the Entities in PDB 1MUE

Entity #1 | Chains: A
THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 197 338 45
95 % 197 339 64 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 197 339 67
70 % 197 341 78
50 % 197 341 109
40 % 197 341 132
30 % 197 341 140
Entity #2 | Chains: B
THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 173 290 75
95 % 216 377 52 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.6
PDBFlex
90 % 218 384 48
70 % 218 408 46
50 % 218 408 84
40 % 1199 1864 4
30 % 1207 1886 6
Entity #3 | Chains: C
HIRUDIN IIB protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures