Sequence Similarity Clusters for the Entities in PDB 1MTY

Entity #1 | Chains: D,E
METHANE MONOOXYGENASE HYDROXYLASE protein, length: 512 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16900
95 % 1 27 882 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 1 27 917
70 % 1 29 921
50 % 1 29 969
40 % 1 29 994
30 % 1 29 966
Entity #2 | Chains: B,C
METHANE MONOOXYGENASE HYDROXYLASE protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 23 765
95 % 1 27 890 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 1 27 925
70 % 1 27 961
50 % 1 29 974
40 % 1 29 997
30 % 1 29 969
Entity #3 | Chains: G,H
METHANE MONOOXYGENASE HYDROXYLASE protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22197
95 % 1 27 907 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 1 27 940
70 % 1 27 971
50 % 1 29 984
40 % 1 29 1008
30 % 1 29 979

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.