Sequence Similarity Clusters for the Entities in PDB 1MTY

Entity #1 | Chains: D,E
METHANE MONOOXYGENASE HYDROXYLASE protein, length: 512 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16647
95 % 1 27 873 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 1 27 907
70 % 1 29 909
50 % 1 29 958
40 % 1 29 983
30 % 1 29 959
Entity #2 | Chains: B,C
METHANE MONOOXYGENASE HYDROXYLASE protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 23 760
95 % 1 27 881 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 1 27 915
70 % 1 27 947
50 % 1 29 963
40 % 1 29 986
30 % 1 29 962
Entity #3 | Chains: G,H
METHANE MONOOXYGENASE HYDROXYLASE protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21855
95 % 1 27 898 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 1 27 930
70 % 1 27 957
50 % 1 29 972
40 % 1 29 997
30 % 1 29 970

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.