Sequence Similarity Clusters for the Entities in PDB 1MTP

Entity #1 | Chains: A
Serine Proteinase Inhibitor (SERPIN), Chain A protein, length: 323 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56079
95 % 1 1 40358
90 % 1 1 38545
70 % 1 1 34224
50 % 1 1 29245
40 % 1 1 25828
30 % 1 1 21964
Entity #2 | Chains: B
Serine Proteinase Inhibitor (SERPIN), Chain B protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74588
95 % 1 1 51873
90 % 1 1 49197
70 % 1 1 43078
50 % 1 1 36743
40 % 1 1 32349
30 % 1 1 27373

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures