Sequence Similarity Clusters for the Entities in PDB 1MTN

Entity #1 | Chains: A,E
ALPHA-CHYMOTRYPSIN protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B,F
ALPHA-CHYMOTRYPSIN protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 34 38 997
95 % 34 38 1204 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 34 38 1228
70 % 36 40 1213
50 % 36 40 1255
40 % 42 46 1142
30 % 50 54 981
Entity #3 | Chains: C,G
ALPHA-CHYMOTRYPSIN protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 34 38 1010
95 % 34 38 1222 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.4
PDBFlex
90 % 34 38 1244
70 % 36 40 1223
50 % 43 47 1104
40 % 52 56 949
30 % 52 56 945
Entity #4 | Chains: D,H
BASIC PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 64 72 252
95 % 84 93 256 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 93 102 246
70 % 112 122 177
50 % 136 156 184
40 % 145 171 182
30 % 145 171 200

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1YPH 2 C, D CHYMOTRYPSIN A, chain B 9913 3.4.21.1 | Details
2 1GG6 2 B GAMMA CHYMOTRYPSIN 9913 3.4.21.1 | Details
3 1GGD 2 B GAMMA CHYMOTRYPSIN 9913 3.4.21.1 | Details
4 2P8O 2 B Chymotrypsin A chain B 9913 3.4.21.1 | Details
5 1GCT 2 B GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
6 3GCT 2 F GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
7 3RU4 4 D Chymotrypsinogen A 9913 3.4.21.1 | Details
8 1AB9 2 B GAMMA-CHYMOTRYPSIN 9913 3.4.21.1 | Details
9 3VGC 2 B GAMMA CHYMOTRYPSIN A-CHYMOTRYPSIN PURCHASED FROM SIGMA AND CONVERTED TO G-CHYMOTRYPSIN BY THE METHOD OF STODDARD ET AL., 1990, BIOCHEMISTRY, VOL. 29, P. 4871-4879 9913 3.4.21.1 | Details
10 1CHO 2 F ALPHA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
11 2GCT 2 B GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
12 5XW1 1 A Trypsin UNP residues 1-133 9823 3.4.21.4 | Details
13 3PO1 2 B Thrombin heavy chain 9606 3.4.21.5 | Details
14 1AFQ 2 B BOVINE GAMMA-CHYMOTRYPSIN 9913 3.4.21.1 | Details
15 5XWA 1 A Trypsin UNP residues 1-133 9823 3.4.21.4 | Details
16 2GMT 2 B GAMMA-CHYMOTRYPSIN 9913 3.4.21.1 | Details
17 7GCH 2 F GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
18 1AKS 1 A ALPHA TRYPSIN 9823 3.4.21.4 | Details
19 6CHA 2 B, F ALPHA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
20 5XW8 1 A Trypsin UNP residues 1-133 9823 3.4.21.4 | Details
21 1GHB 2 F GAMMA-CHYMOTRYPSIN 9913 3.4.21.1 | Details
22 2GCH 2 F GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
23 2VGC 2 B GAMMA CHYMOTRYPSIN A-CHYMOTRYPSIN PURCHASED FROM SIGMA AND CONVERTED TO G-CHYMOTRYPSIN BY THE METHOD OF STODDARD ET AL., 1990, BIOCHEMISTRY, VOL. 29, P. 4871-4879 9913 3.4.21.1 | Details
24 5XW9 1 A Trypsin UNP residues 1-133 9823 3.4.21.4 | Details
25 1VGC 2 B GAMMA CHYMOTRYPSIN A-CHYMOTRYPSIN PURCHASED FROM SIGMA AND CONVERTED TO G-CHYMOTRYPSIN BY THE METHOD OF STODDARD ET AL., 1990, BIOCHEMISTRY, VOL. 29, P. 4871-4879 9913 3.4.21.1 | Details
26 3GCH 2 B GAMMA-CHYMOTRYPSIN 9913 3.4.21.1 | Details
27 4GCH 2 F GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
28 6GCH 2 F GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
29 1N8O 2 B Chymotrypsin A, b chain 9913 3.4.21.1 | Details
30 1GHA 2 F GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
31 1GMH 2 F GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
32 1UCY 2 H THROMBIN CHYMOTRYPSINOGEN NUMBERING (RATHER THAN SEQUENTIAL) SYSTEM IS USED, BASED ON THE TOPOLOGICAL ALIGNMENT WITH THE STRUCTURE OF CHYMOTRYPSINOGEN (H.BRANDSTETTER ET AL., 1992, J.MOL.BIOL., V. 226, 1085). THE N-TERMINUS OF THE FIBRINOPEPTIDE IS ACETYLATED. FIBRINOPEPTIDE SEQUENCE NUMBERS ARE ACE 6 TO ARG 19. A NEW RESIDUE, OPR, HAS BEEN DEFINED FOR THE ARG/GLY COMBINATION IN WHICH THE AMIDE NITROGEN HAS BEEN REPLACED WITH A CH2, MAKING THE NORMAL AMIDE BOND BETWEEN THESE TWO RESIDUES A KETONE BOND. THE FIBRINOPEPTIDE NUMBERING IS CONSEQUENTLY INCREMENTED BY 1 AFTER THIS RESIDUE IN KEEPING WITH THE FIBRINOGEN NUMBERING SCHEME. THERE ARE ALTERNATE CONFORMATIONS FOR RESIDUES PRO 18 AND ARG 19 IN FIBRINOPEPTIDE III. 9913 3.4.21.5 | Details
33 4VGC 2 B GAMMA CHYMOTRYPSIN A-CHYMOTRYPSIN PURCHASED FROM SIGMA AND CONVERTED TO G-CHYMOTRYPSIN BY THE METHOD OF STODDARD ET AL., 1990, BIOCHEMISTRY, VOL. 29, P. 4871-4879 9913 3.4.21.1 | Details
34 1GMC 2 F GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
35 1GMD 2 F GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
36 1RIW 2 B thrombin heavy chain, B residues 37-183 9606 3.4.21.5 | Details
37 1UHB 1 A Trypsin 9823 3.4.21.4 | Details
38 1BBR 2 H EPSILON-THROMBIN 9913 3.4.21.5 | Details
39 1CA0 2 B, G BOVINE CHYMOTRYPSIN 9913 3.4.21.1 | Details
40 1BHX 2 B ALPHA THROMBIN 9606 3.4.21.5 | Details
41 1HJA 2 B ALPHA-CHYMOTRYPSIN 9913 3.4.21.1 | Details
42 1YCP 4 K EPSILON THROMBIN 9913 3.4.21.5 | Details
43 2PKS 2 B Thrombin heavy chain fragment Residues 364-510 9606 3.4.21.5 | Details
44 5GCH 2 F GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
45 3BG4 2 B Chymotrypsin A chain B 9913 3.4.21.1 | Details
46 1CBW 2 B, G BOVINE CHYMOTRYPSIN 9913 3.4.21.1 | Details
47 2JET 2 B CHYMOTRYPSINOGEN B CHAIN B RESIDUES 37-164 10116 3.4.21.1 | Details
48 1KDQ 1 A CHYMOTRYPSIN B, B CHAIN 10116 3.4.21.1 | Details
49 1VIT 4 F EPSILON THROMBIN 9913 3.4.21.5 | Details
50 1MTN 2 B, F ALPHA-CHYMOTRYPSIN 9913 3.4.21.1 | Details
51 8GCH 2 F GAMMA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
52 5CHA 2 B, F ALPHA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
53 4CHA 2 B, F ALPHA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details
54 2CHA 2 B, F ALPHA-CHYMOTRYPSIN A 9913 3.4.21.1 | Details