Sequence Similarity Clusters for the Entities in PDB 1MTN

Entity #1 | Chains: A,E
ALPHA-CHYMOTRYPSIN protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B,F
ALPHA-CHYMOTRYPSIN protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 34 38 1015
95 % 34 38 1230 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 34 38 1253
70 % 36 40 1238
50 % 36 40 1277
40 % 42 46 1162
30 % 50 54 998
Entity #3 | Chains: C,G
ALPHA-CHYMOTRYPSIN protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 34 38 1036
95 % 34 38 1249 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.4
PDBFlex
90 % 34 38 1271
70 % 36 40 1247
50 % 43 47 1130
40 % 52 56 970
30 % 52 56 962
Entity #4 | Chains: D,H
BASIC PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 65 73 248
95 % 85 94 255 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 94 103 246
70 % 113 123 181
50 % 137 157 188
40 % 146 172 184
30 % 146 172 202

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures