Sequence Similarity Clusters for the Entities in PDB 1MTN

Entity #1 | Chains: A,E
ALPHA-CHYMOTRYPSIN protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B,F
ALPHA-CHYMOTRYPSIN protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 34 38 832
95 % 34 38 1130 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 34 38 1154
70 % 36 40 1150
50 % 36 40 1186
40 % 38 42 1155
30 % 46 50 994
Entity #3 | Chains: C,G
ALPHA-CHYMOTRYPSIN protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 34 38 833
95 % 34 38 1131 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 34 38 1156
70 % 36 40 1153
50 % 39 43 1122
40 % 48 52 988
30 % 48 52 962
Entity #4 | Chains: D,H
BASIC PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 44 326
95 % 81 90 248
90 % 86 95 252
70 % 105 115 175
50 % 128 148 178
40 % 136 162 176
30 % 136 162 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.