Sequence Similarity Clusters for the Entities in PDB 1MTB

Entity #1 | Chains: A,B
PROTEASE RETROPEPSIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 121 123 106
95 % 121 123 133 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 615 659 3
70 % 639 683 5
50 % 662 709 5
40 % 672 719 8
30 % 674 721 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures