Sequence Similarity Clusters for the Entities in PDB 1MT8

Entity #1 | Chains: A,B
PROTEASE RETROPEPSIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 3860
95 % 499 571 2
90 % 541 633 2
70 % 564 660 4
50 % 578 686 3
40 % 588 696 7
30 % 590 698 12
Entity #2 | Chains: P
Capsid-p2 substrate peptide of HIV-1 Gag polyprotein protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.