Sequence Similarity Clusters for the Entities in PDB 1MT1

Entity #1 | Chains: A,C,E,G,I,K
PYRUVOYL-DEPENDENT ARGININE DECARBOXYLASE BETA CHAIN protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 2989
95 % 4 4 3300 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 1.8
PDBFlex
90 % 4 4 3355
70 % 4 4 3298
50 % 4 4 3227
40 % 4 4 3114
30 % 4 4 2873
Entity #2 | Chains: B,D,F,H,J,L
PYRUVOYL-DEPENDENT ARGININE DECARBOXYLASE ALPHA CHAIN protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 5919
95 % 4 4 3220 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 4 4 3203
70 % 4 4 3153
50 % 4 4 3108
40 % 4 4 3022
30 % 4 4 2792

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures