Sequence Similarity Clusters for the Entities in PDB 1MT1

Entity #1 | Chains: A,C,E,G,I,K
PYRUVOYL-DEPENDENT ARGININE DECARBOXYLASE BETA CHAIN protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 2911
95 % 4 4 3196 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 1.5
PDBFlex
90 % 4 4 3239
70 % 4 4 3211
50 % 4 4 3135
40 % 4 4 3058
30 % 4 4 2865
Entity #2 | Chains: B,D,F,H,J,L
PYRUVOYL-DEPENDENT ARGININE DECARBOXYLASE ALPHA CHAIN protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 4071
95 % 4 4 3184 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 4 4 3225
70 % 4 4 3198
50 % 4 4 3122
40 % 4 4 3043
30 % 4 4 2853

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.