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An Information Portal to 108124 Biological Macromolecular Structures

Structural basis for the transition from initiation to elongation transcription in T7 RNA polymerase
Sequence Clustering and Redundancy Reduction Results
1MSW
Sequence Clusters for the Sequence Entities in PDB 1MSW
Entity #1: Chains: T - Template DNA dna, length: 20 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: N - Non-Template DNA dna, length: 17 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: R - RNA message rna, length: 10 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: D - DNA-directed RNA polymerase protein, length: 883 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 10 2009
95% 1 13 2059
90% 1 13 2089
70% 1 13 2099
50% 1 13 2119
40% 1 13 2131
30% 1 13 2008
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.