Sequence Similarity Clusters for the Entities in PDB 1MSJ

Entity #1 | Chains: A
PROTEIN (ANTIFREEZE PROTEIN TYPE III) protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 70310
95 % 26 33 1620 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 26 33 1655
70 % 27 36 1517
50 % 29 38 1430
40 % 29 38 1446
30 % 29 38 1422

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.