Sequence Similarity Clusters for the Entities in PDB 1MSI

Entity #1 | Chains: A
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 14032
95 % 3 33 1655 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 3 33 1692
70 % 4 36 1547
50 % 5 38 1455
40 % 5 38 1470
30 % 5 38 1446

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.