Sequence Similarity Clusters for the Entities in PDB 1MSH

Entity #1 | Chains: A,B
HUMAN MELANOMA GROWTH STIMULATORY ACTIVITY protein, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 14711
95 % 2 3 13909
90 % 2 3 13680
70 % 4 5 8032
50 % 30 33 599
40 % 30 33 634
30 % 50 53 451

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures