Sequence Similarity Clusters for the Entities in PDB 1MSB

Entity #1 | Chains: A,B
MANNOSE-BINDING PROTEIN-A protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14390
95 % 3 3 13636 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 3 3 13411
70 % 3 3 12592
50 % 16 16 1790
40 % 16 16 1791
30 % 16 16 1748

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures