Sequence Similarity Clusters for the Entities in PDB 1MSA

Entity #1 | Chains: A,B,C,D
AGGLUTININ protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 11059
95 % 2 3 10699 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 3 10551
70 % 4 5 6865
50 % 9 20 1389
40 % 17 37 625
30 % 18 38 610

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures