Sequence Similarity Clusters for the Entities in PDB 1MSA

Entity #1 | Chains: A,B,C,D
AGGLUTININ protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 10949
95 % 2 3 10936
90 % 2 3 10787
70 % 4 5 7207
50 % 9 20 1342
40 % 17 34 689
30 % 18 38 585

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures