Sequence Similarity Clusters for the Entities in PDB 1MS8

Entity #1 | Chains: A,B
trans-sialidase protein, length: 648 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 2832
95 % 8 14 2734 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 8 14 2782
70 % 12 24 1772
50 % 12 24 1806
40 % 12 24 1802
30 % 12 24 1757

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures