Sequence Similarity Clusters for the Entities in PDB 1MS8

Entity #1 | Chains: A,B
trans-sialidase protein, length: 648 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 2583
95 % 8 14 2521 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.5
PDBFlex
90 % 8 14 2569
70 % 12 24 1622
50 % 12 24 1667
40 % 12 24 1676
30 % 12 24 1636

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.