Sequence Similarity Clusters for the Entities in PDB 1MS7

Entity #1 | Chains: A,B,C
Glutamate receptor subunit 2 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 67 119 96
95 % 96 161 61 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.1
PDBFlex
90 % 109 184 61
70 % 109 184 74
50 % 168 278 37
40 % 168 279 51
30 % 206 360 52

Instructions

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4IGT 1 A Glutamate receptor 2 Ligand-binding domain, UNP RESIDUES 413-527, 653-796 10116
2 4FAT 1 A Glutamate receptor 2 ligand binding domain 10116
3 3TKD 1 A, B GLUTAMATE RECEPTOR 2 Ligand binding domain 10116
4 1MQI 1 A glutamate receptor 2 ligand binding core (S1S2J) 10116
5 4O3C 1 A Glutamate receptor 2 Ligand binding domain (unp residues 413-527 and unp residues 653-796) 10116
6 4Z0I 1 A, B Glutamate receptor 2,Glutamate receptor 2 10116
7 4U22 1 A Glutamate receptor 2 10116
8 4U2R 1 A, B, C, D Glutamate receptor 2 10116
9 4U4X 1 A, B Glutamate receptor 2,Glutamate receptor 2 UNP residues 413-527, UNP residues 653-796 10116
10 1M5E 1 A, B, C Glutamate receptor 2 GluR2-flop ligand binding core (S1S2J) 10116
11 3H6W 1 A, B Glutamate receptor 2 iGluR2-flop ligand-binding core: UNP residues 413-796 10116
12 5YBF 1 A, B, C, D, E, F Glutamate receptor 2,Glutamate receptor 2 UNP RESIDUES 413-527,UNP RESIDUES 653-796 9606
13 2XXH 1 A, B, C GLUTAMATE RECEPTOR 2 GLUA2FLOPS1-GLYTHR-S2 LIGAND BINDING DOMAIN, RESIDUES 413-527,653-796 10116
14 2XX8 1 A, B, C GLUTAMATE RECEPTOR 2 GLUA2FLOPS1-GLYTHR-S2 LIGAND BINDING DOMAIN, RESIDUES 413-527,653-796 10116
15 5YBG 1 A, B, C, D, E, F Glutamate receptor 2,Glutamate receptor 2 UNP RESIDUES 413-527,UNP RESIDUES 653-796 9606
16 3KGC 1 A, B Glutamate receptor 2 extracellular domains residues 414-527 and 653-795 10116
17 4IY6 1 A Glutamate receptor 2 Ligand binding domain, UNP RESIDUES 413-527, 653-796 10116
18 2XXI 1 A, B, C GLUTAMATE RECEPTOR 2 GLUA2FLOPS1-GLYTHR-S2 LIGAND BINDING DOMAIN, RESIDUES 413-527,653-796 10116
19 1M5C 1 A Glutamate receptor 2 flop ligand binding core (S1S2J) 10116
20 5H8S 1 A, B, C Glutamate receptor 2,Glutamate receptor 2 UNP residues 413-527, GT linker, UNP residues 653-796 9606
21 2AL5 1 A, B Glutamate receptor 2 ligand binding core (S1S2J) 10116
22 3RTF 1 B, D, F Glutamate receptor 2 SEE REMARK 999 10116
23 1MM7 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
24 4O3A 1 A, B, C Glutamate receptor 2 Ligand binding domain (unp residues 413-527 and unp residues 653-736) 10116
25 1WVJ 1 A ionotropic glutamate receptor 2 Flop ligand-binding core of GluR2(GluR2-S1S2J) 10116
26 1MQJ 1 A glutamate receptor 2 ligand binding core (S1S2J) 10116
27 1M5D 1 A Glutamate receptor 2 flop ligand binding core (S1S2J-Y702F) 10116
28 1XHY 1 A Glutamate receptor GluR2 flop ligand-binding core (S1S2J), UNP residues 413-527 and 653-796 10116
29 4O3B 1 A, B Glutamate receptor 2 Ligand binding domain (unp residues 413-527 and unp residues 653-736) 10116
30 1SYH 1 A Glutamate receptor 2 GLUR2-FLOP LIGAND-BINDING CORE (S1S2J) 10116
31 2AL4 1 A, B, C, D, E, F Glutamate receptor 2 ligand binding core (S1S2J) 10116
32 4U23 1 A Glutamate receptor 2,Glutamate receptor 2 10116
33 4U1O 1 A Glutamate receptor 2 10116
34 3PMV 1 A Glutamate receptor 2 S1-S2 fusion in which Gly118 and Thr119 replace a membrane-spanning region Ligand binding domain, residues 413 to 527 and 653 to 796 10116
35 4U4S 1 A, B Glutamate receptor 2,Glutamate receptor 2 AMPA RECEPTOR LIGAND BINDING DOMAIN, GLUA2 S1S2J-L483Y-N754S, UNP RESIDUES 413-527 AND 653-796; CRYSTALLIZED WITH ALLOSTERIC MODULATOR BPAM-25. TRANSMEMBRANE REGIONS WERE GENETICALLY REMOVED AND REPLACED WITH A GLY-THR LINKER (118-119). THE FIRST TWO RESIDUES (GLY, ALA) ARE CLONING REMNANTS. UNP residues 413-527, UNP residues 653-796 10116
36 3O6G 1 A Glutamate receptor 2 S1-S2 fusion in which Gly118 and Thr119 replace a membrane-spanning region Ligand binding domain, UNP residues 413 to 527 and 653 to 796 10116
37 3B6W 1 A, B, C, D Glutamate receptor 2 10116
38 1MY3 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
39 3H6U 1 A Glutamate receptor 2 iGluR2-flop ligand-binding core: UNP residues 413-796 10116
40 4N07 1 A, B, C Glutamate receptor 2 unp residues 413-527, unp reisdues 653-796 10116
41 3O2A 1 A Glutamate receptor 2 S1-S2 fusion in which Gly118 and Thr119 replace a membrane-spanning region Ligand binding domain, UNP residues 413 to 527 and 653 to 796 10116
42 2XHD 1 A, B GLUTAMATE RECEPTOR 2 THIS IS AN S1-S2 FUSION IN WHICH GLY 118 AND THR 119 REPLACE A MEMBRANE SPANNING REGION. LIGAND BINDING DOMAIN, RESIDUES 412-427 AND 653-796 9606
43 3M3L 1 A, D, G Glutamate receptor 2 UNP residues 414-527, 652-794 10116
44 3TZA 1 A, B Glutamate receptor 2,Glutamate receptor 2 The protein crystallized is the extracellular ligand-binding domian of GluA2. Transmembrane regions were genetically removed and replaced with a Gly-Thr linker. Ligand binding domain, UNP resiudes 413-527,UNP residues 653-796 10116
45 3T96 1 B, D, F Glutamate receptor 2 SEE REMARK 999 10116
46 4U1Z 1 A Glutamate receptor 2,Glutamate receptor 2 10116
47 3O6I 1 A Glutamate receptor 2 S1-S2 fusion in which Gly118 and Thr119 replace a membrane-spanning region Ligand binding domain, UNP residues 413 to 527 and 653 to 796 10116
48 4IY5 1 A, B Glutamate receptor 2 Ligand binding domain, UNP RESIDUES 413-527, 653-796 10116
49 1MXU 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
50 1M5B 1 A, B, C Glutamate receptor 2 flop ligand binding core (S1S2J) 10116
51 3LSF 1 B, E, H Glutamate receptor 2 10116
52 1FTM 1 A, B, C GLUTAMATE RECEPTOR SUBUNIT 2 GLUR2-FLOP LIGAND BINDING CORE (S1S2J) 10116
53 3T93 1 B, D, F Glutamate receptor 2 SEE REMARK 999 10116
54 3UA8 1 A Glutamate receptor 2 SEE REMARK 999 9606
55 3TDJ 1 A, B Glutamate receptor 2 Ligand binding domain, UNP residues 413-527 and 653-796 10116
56 3T9U 1 A, B, C Glutamate receptor 2 SEE REMARK 999 10116
57 1NNP 1 A, B Glutamate receptor 2 GluR2-flop ligand-binding core (S1S2J) 10116
58 1NNK 1 A Glutamate receptor 2 GluR2-flop ligand-binding core (S1S2J) 10116
59 1LBC 1 A, B, C Glutamine Receptor 2 ligand binding core 10116
60 1MY2 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
61 3T9V 1 A, B Glutamate receptor 2 SEE REMARK 999 10116
62 3BKI 1 B, C, D, P Glutamate receptor 2 10116
63 3O29 1 A Glutamate receptor 2 S1-S2 fusion in which Gly118 and Thr119 replace a membrane-spanning region Ligand binding domain, UNP residues 413 to 527 and 653 to 796 10116
64 2XX9 1 A, B, C GLUTAMATE RECEPTOR 2 GLUA2FLOPS1-GLYTHR-S2 LIGAND BINDING DOMAIN, RESIDUES 413-527,653-796 10116
65 4GXS 1 B, D Glutamate receptor 2 UNP Residues 652-794 10116
66 1M5F 1 A, B, C Glutamate receptor 2 flop ligand binding core (S1S2J-Y702F) 10116
67 1MS7 1 A, B, C Glutamate receptor subunit 2 GluR2-flop ligand-binding core (S1S2J) 10116
68 3O28 1 A Glutamate receptor 2 S1-S2 fusion in which Gly118 and Thr119 replace a membrane-spanning region Ligand binding domain, UNP residues 413 to 527 and 653 to 796 10116
69 3B6Q 1 A Glutamate receptor 2 10116
70 3PMX 1 A Glutamate receptor 2 S1-S2 fusion in which Gly118 and Thr119 replace a membrane-spanning region Ligand binding domain, residues 413 to 527 and 653 to 796 10116
71 1MY4 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
72 3BFU 1 A, B, C, D Glutamate receptor 2 residues 1-263 10116
73 3IL1 1 B, E, H Glutamate receptor 2 S1S2 binding domain 10116
74 1FTL 1 A, B GLUTAMATE RECEPTOR SUBUNIT 2 LIGAND BINDING CORE (S1S2J) 10116
75 3ILU 1 B, E, H Glutamate receptor 2 S1S2 binding domain 10116
76 3T9H 1 B, D, F Glutamate receptor 2 SEE REMARK 999 10116
77 3H03 1 A, B, D, G Glutamate receptor 2 UNP residues 414-527, 652-794 10116
78 4Q30 1 B, D, F Glutamate receptor 2 CHIMERIC PROTEIN 10116
79 4G8M 1 A, B Glutamate receptor 2 UNP residues 413-527, 653-796 10116
80 1MXV 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
81 1MY1 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
82 3IJO 1 B, E, H Glutamate receptor 2 10116
83 1MXW 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
84 1MY0 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
85 1MXZ 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
86 2ANJ 1 A Glutamate receptor 2 Ligand Binding Core 10116
87 3H6V 1 A, B Glutamate receptor 2 iGluR2-flop ligand-binding core: UNP residues 413-796 10116
88 1MXY 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
89 2XX7 1 A, B, C GLUTAMATE RECEPTOR 2 GLUA2 FLOP ISOFORM S1-DOMAIN-GLYTHR-S2-DOMAIN LIGAND BINDING DOMAIN, RESIDUES 413-527,653-795 10116
90 1MXX 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
91 1N0T 1 A, B, C, D Glutamate receptor 2 GluR2-flop ligand-binding core (S1S2J). 10116
92 1MQG 1 A, B glutamate receptor 2 ligand binding core (S1S2J) 10116
93 5BUU 1 A, B Glutamate receptor 2,Glutamate receptor 2 Ligand-binding domain, UNP residues 392-506 and 632-775 connected by a GT linker (numbering without signal peptide) UNP residues 413-527,UNP residues 653-796 10116
94 3IK6 1 B, E, H Glutamate receptor 2 S1S2 binding domain 10116
95 3BBR 1 A, B Glutamate receptor 2 Ligand binding core 10116
96 1LBB 1 A Glutamine receptor 2 ligand binding core (flop) 10116
97 1MM6 1 A, B GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
98 3RTW 1 B, D, F Glutamate receptor 2 SEE REMARK 999 10116
99 1SYI 1 A, B Glutamate receptor 2 GLUR2-FLOP LIGAND-BINDING CORE (S1S2J) 10116
100 3R7X 1 A, B Glutamate receptor 2 SEE REMARK 999 9606
101 3LSL 1 A, D, G Glutamate receptor 2 10116
102 3B6T 1 A Glutamate receptor 2 10116
103 2AIX 1 A Glutamate receptor 2 GLUR2-FLOP LIGAND-BINDING CORE (S1S2J). 10116
104 3ILT 1 B, E, H Glutamate receptor 2 S1S2 binding domain 10116
105 3H6T 1 A, B, C Glutamate receptor 2 iGluR2-flop ligand-binding core: UNP residues 413-796 10116
106 3O6H 1 A Glutamate receptor 2 S1-S2 fusion in which Gly118 and Thr119 replace a membrane-spanning region Ligand binding domain, UNP residues 413 to 527 and 653 to 796 10116
107 1FTO 1 A, B GLUTAMATE RECEPTOR SUBUNIT 2 LIGAND BINDING CORE (S1S2J) 10116
108 1FTJ 1 A, B, C GLUTAMATE RECEPTOR SUBUNIT 2 LIGAND BINDING CORE (S1S2J)) 10116
109 4ISU 1 A, B, C, D Glutamate receptor 2 Ligand-binding domain 10116
110 1FW0 1 A GLUTAMATE RECEPTOR SUBUNIT 2 LIGAND BINDING CORE (S1S2J) 10116
111 3BFT 1 A, B, C Glutamate receptor 2 residues 1-263 10116
112 2P2A 1 A, B Glutamate receptor 2 GluR2-Flop ligand-binding core (Residues 413-527, 653-796) 10116
113 3PMW 1 A Glutamate receptor 2 S1-S2 fusion in which Gly118 and Thr119 replace a membrane-spanning region Ligand binding domain, residues 413 to 527 and 653 to 796 10116
114 1LB8 1 A, B Glutamate receptor 2 ligand-binding core (flop) 10116
115 1LB9 1 A, B Glutamate receptor 2 ligand binding core (flop) 10116
116 2CMO 1 A, B GLUTAMATE RECEPTOR 2 RESIDUES 413-527,653-796 10116
117 4L17 1 A, C, E, G Glutamate receptor 2 Ligand binding domain (UNP residues 413-527, 653-796) 10116
118 3IJX 1 B, D, H Glutamate receptor 2 10116
119 3H06 1 B, E, G, H, J, L, N, P Glutamate receptor 2 UNP residues 414-527, 652-794 10116