Sequence Similarity Clusters for the Entities in PDB 1MS7

Entity #1 | Chains: A,B,C
Glutamate receptor subunit 2 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 41 73 111
95 % 92 157 62 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.1
PDBFlex
90 % 105 180 61
70 % 105 180 71
50 % 164 272 36
40 % 164 273 48
30 % 178 289 58

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5NG9 1 A Glutamate receptor 2 THE PROTEIN CRYSTALLIZED IS THE EXTRACELLULAR LIGAND-BINDING DOMIAN OF GLUA2. TRANSMEMBRANE REGIONS WERE REPLACED WITH A GLY-THR LINKER (118-119). SEQUENCE MATCHES DISCONTINUOUSLY WITH THE REFERENCE DATABASE (413-527, 653-797). RESIDUES 1-2 ARE CLONING REMNANTS. 10116
2 4IGT 1 A Glutamate receptor 2 Ligand-binding domain, UNP RESIDUES 413-527, 653-796 10116
3 5NIH 1 A, B Glutamate receptor 2 THE PROTEIN CRYSTALLIZED IS THE EXTRACELLULAR LIGAND-BINDING DOMIAN OF GLUA2. TRANSMEMBRANE REGIONS WERE REPLACED WITH A GLY-THR LINKER (118-119). SEQUENCE MATCHES DISCONTINUOUSLY WITH THE REFERENCE DATABASE (413-527, 653-797). RESIDUES 1-2 ARE CLONING REMNANTS. 10116
4 1MQI 1 A glutamate receptor 2 ligand binding core (S1S2J) 10116
5 4O3C 1 A Glutamate receptor 2 Ligand binding domain (unp residues 413-527 and unp residues 653-796) 10116
6 4Z0I 1 A, B Glutamate receptor 2,Glutamate receptor 2 10116
7 5FHM 1 A, B Glutamate receptor 2,Glutamate receptor 2 Protein crystallized is the extracellular ligand-binding domain of GluA2. Transmembrane regions genetically removed and replaced with Gly-Thr linker (residues 118-119). Protein consists of UNP residues 413-527 and 653-797, numbering with signal peptide of 21 residues. The first two residues (Gly, Ala) are cloning remnants. 10116
8 1MQD 1 A, B, C, D Glutamate receptor subunit 2 Tetherd dimer linked by GLY 115 and THR 116 GluR2-flop ligand-binding core (S1S2J) 10116
9 4LZ5 1 A, B, C Glutamate receptor 2 SEE REMARK 999 10116
10 1M5E 1 A, B, C Glutamate receptor 2 GluR2-flop ligand binding core (S1S2J) 10116
11 5FHN 1 A Glutamate receptor 2,Glutamate receptor 2 ligand-binding domain of GluA2. Transmembrane regions genetically removed and replaced with Gly-Thr linker (residues 118-119). Protein consists of UNP residues 413-527 and 653-797, numbering with signal peptide of 21 residues. The first two residues (Gly, Ala) are cloning remnants. 10116
12 3DP6 1 A, B, C Glutamate receptor 2 S1S2 binding domain 10116
13 1M5C 1 A Glutamate receptor 2 flop ligand binding core (S1S2J) 10116
14 2AL5 1 A, B Glutamate receptor 2 ligand binding core (S1S2J) 10116
15 3RTF 1 B, D, F Glutamate receptor 2 SEE REMARK 999 10116
16 1MM7 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
17 4O3A 1 A, B, C Glutamate receptor 2 Ligand binding domain (unp residues 413-527 and unp residues 653-736) 10116
18 1WVJ 1 A ionotropic glutamate receptor 2 Flop ligand-binding core of GluR2(GluR2-S1S2J) 10116
19 1MQJ 1 A glutamate receptor 2 ligand binding core (S1S2J) 10116
20 3RN8 1 A, B, C Glutamate receptor 2 UNP residues 413-527, 653-812 9606
21 5CBS 1 A, B, C, D Glutamate receptor 2,Glutamate receptor 2 UNP residues 413-527,UNP residues 653-797 10116
22 4O3B 1 A, B Glutamate receptor 2 Ligand binding domain (unp residues 413-527 and unp residues 653-736) 10116
23 3RNN 1 A, B, C Glutamate receptor 2 UNP residues 413-527, 653-812 9606
24 4H8J 1 A, B, C, D Glutamate receptor 2 SEE REMARK 999 10116
25 1SYH 1 A Glutamate receptor 2 GLUR2-FLOP LIGAND-BINDING CORE (S1S2J) 10116
26 2AL4 1 A, B, C, D, E, F Glutamate receptor 2 ligand binding core (S1S2J) 10116
27 1MY3 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
28 4YMA 1 A, B Glutamate receptor 2 The protein comprises segment S1 residues 413-527, a GT linker and S2 residues 653-797. 10116
29 4X48 1 A, B, C Glutamate receptor 2 Ligand binding domain, engineered single chain 10116
30 3M3L 1 A, D, G Glutamate receptor 2 UNP residues 414-527, 652-794 10116
31 3TZA 1 A, B Glutamate receptor 2,Glutamate receptor 2 The protein crystallized is the extracellular ligand-binding domian of GluA2. Transmembrane regions were genetically removed and replaced with a Gly-Thr linker. Ligand binding domain, UNP resiudes 413-527,UNP residues 653-796 10116
32 1MXU 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
33 1M5B 1 A, B, C Glutamate receptor 2 flop ligand binding core (S1S2J) 10116
34 4LZ8 1 A, B, C Glutamate receptor 2 SEE REMARK 999 10116
35 1FTM 1 A, B, C GLUTAMATE RECEPTOR SUBUNIT 2 GLUR2-FLOP LIGAND BINDING CORE (S1S2J) 10116
36 1NNP 1 A, B Glutamate receptor 2 GluR2-flop ligand-binding core (S1S2J) 10116
37 1NNK 1 A Glutamate receptor 2 GluR2-flop ligand-binding core (S1S2J) 10116
38 1MY2 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
39 3BKI 1 B, C, D, P Glutamate receptor 2 10116
40 4GXS 1 B, D Glutamate receptor 2 UNP Residues 652-794 10116
41 1MS7 1 A, B, C Glutamate receptor subunit 2 GluR2-flop ligand-binding core (S1S2J) 10116
42 1MY4 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
43 3BFU 1 A, B, C, D Glutamate receptor 2 residues 1-263 10116
44 5CBR 1 A Glutamate receptor 2,Glutamate receptor 2 10116
45 1FTL 1 A, B GLUTAMATE RECEPTOR SUBUNIT 2 LIGAND BINDING CORE (S1S2J) 10116
46 3H03 1 A, B, D, G Glutamate receptor 2 UNP residues 414-527, 652-794 10116
47 4G8M 1 A, B Glutamate receptor 2 UNP residues 413-527, 653-796 10116
48 1MXV 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
49 1MY1 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
50 1MXW 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
51 1MY0 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
52 1MXZ 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
53 3PD9 1 A, B Glutamate receptor 2 UNP residues 413-527, 653-795 10116
54 1MXY 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
55 1MXX 1 A, B, C GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
56 1N0T 1 A, B, C, D Glutamate receptor 2 GluR2-flop ligand-binding core (S1S2J). 10116
57 1MQG 1 A, B glutamate receptor 2 ligand binding core (S1S2J) 10116
58 4LZ7 1 A, B, C Glutamate receptor 2 SEE REMARK 999 10116
59 1MM6 1 A, B GLUTAMATE RECEPTOR 2 LIGAND BINDING CORE (S1S2J) 10116
60 3RTW 1 B, D, F Glutamate receptor 2 SEE REMARK 999 10116
61 3LSL 1 A, D, G Glutamate receptor 2 10116
62 2AIX 1 A Glutamate receptor 2 GLUR2-FLOP LIGAND-BINDING CORE (S1S2J). 10116
63 5FHO 1 A, B, C, D Glutamate receptor 2,Glutamate receptor 2 Protein crystallized is the extracellular ligand-binding domain of GluA2. Transmembrane regions genetically removed and replaced with Gly-Thr linker (residues 118-119). Protein consists of UNP residues 413-527 and 653-797, numbering with signal peptide of 21 residues. The first two residues (Gly, Ala) are cloning remnants. 10116
64 1FTO 1 A, B GLUTAMATE RECEPTOR SUBUNIT 2 LIGAND BINDING CORE (S1S2J) 10116
65 1FTJ 1 A, B, C GLUTAMATE RECEPTOR SUBUNIT 2 LIGAND BINDING CORE (S1S2J)) 10116
66 4ISU 1 A, B, C, D Glutamate receptor 2 Ligand-binding domain 10116
67 1FW0 1 A GLUTAMATE RECEPTOR SUBUNIT 2 LIGAND BINDING CORE (S1S2J) 10116
68 3BFT 1 A, B, C Glutamate receptor 2 residues 1-263 10116
69 2P2A 1 A, B Glutamate receptor 2 GluR2-Flop ligand-binding core (Residues 413-527, 653-796) 10116
70 3PD8 1 A, B, C Glutamate receptor 2 UNP residues 413-527, 653-795 10116
71 2CMO 1 A, B GLUTAMATE RECEPTOR 2 RESIDUES 413-527,653-796 10116
72 3B7D 1 A, B, C, D, E, F, G, H Glutamate receptor 2 10116
73 3H06 1 B, E, G, H, J, L, N, P Glutamate receptor 2 UNP residues 414-527, 652-794 10116