Sequence Similarity Clusters for the Entities in PDB 1MRD

Entity #1 | Chains: L
IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 20801
95 % 70 145 147
90 % 77 155 149
70 % 842 2280 1
50 % 1724 4619 1
40 % 1724 4619 1
30 % 1941 5440 1
Entity #2 | Chains: H
IGG2B-KAPPA JEL103 FAB (HEAVY CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 20949
95 % 2 4 18234
90 % 2 5 13879
70 % 833 2238 2
50 % 1725 4619 1
40 % 1725 4619 1
30 % 1942 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.