Sequence Similarity Clusters for the Entities in PDB 1MR1

Entity #1 | Chains: A,B
Mothers against decapentaplegic homolog 4 protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 8820
95 % 5 5 9102 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 5 5 9012
70 % 5 5 8651
50 % 5 5 7848
40 % 5 5 7220
30 % 5 5 6374
Entity #2 | Chains: C,D
Ski oncogene protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47147
95 % 1 1 35238
90 % 1 1 33672
70 % 1 1 29958
50 % 1 1 25586
40 % 1 1 22547
30 % 1 1 19091

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.