Sequence Similarity Clusters for the Entities in PDB 1MQT

Entity #1 | Chains: A
Polyprotein protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52785
95 % 1 1 37600
90 % 2 2 25983
70 % 2 6 10319
50 % 4 14 4109
40 % 73 147 270
30 % 73 147 275
Entity #2 | Chains: B
Polyprotein Capsid Protein protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53661
95 % 2 2 27364
90 % 2 2 26438
70 % 4 15 4019
50 % 68 150 286
40 % 68 150 304
30 % 84 178 163
Entity #3 | Chains: C
Polyprotein Capsid Protein protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54805
95 % 2 2 27919
90 % 2 2 26972
70 % 4 15 4028
50 % 45 114 414
40 % 73 158 253
30 % 89 188 148
Entity #4 | Chains: D
Polyprotein Capsid Protein protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67407
95 % 2 2 33514
90 % 4 12 5642
70 % 32 82 532
50 % 60 116 409
40 % 60 116 445
30 % 60 116 439

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.