Sequence Similarity Clusters for the Entities in PDB 1MQS

Entity #1 | Chains: A
Sly1 Protein protein, length: 671 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51107
95 % 1 1 38006
90 % 1 1 36294
70 % 1 1 32303
50 % 1 1 27684
40 % 1 1 24508
30 % 1 1 20909
Entity #2 | Chains: B
Integral Membrane Protein SED5 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74208
95 % 1 1 51536
90 % 1 1 48875
70 % 1 1 42852
50 % 1 1 36545
40 % 1 1 32162
30 % 1 1 27189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures