Sequence Similarity Clusters for the Entities in PDB 1MQQ

Entity #1 | Chains: A
ALPHA-D-GLUCURONIDASE protein, length: 679 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28332
95 % 2 7 11266 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 2 7 11101
70 % 2 7 10504
50 % 2 7 9112
40 % 5 12 3624
30 % 5 12 3328

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1L8N 1 A ALPHA-D-GLUCURONIDASE 1422 3.2.1.131 | Details
2 1MQQ 1 A ALPHA-D-GLUCURONIDASE 1422 3.2.1.131 | Details
3 1K9D 1 A alpha-D-glucuronidase 1422 3.2.1.131 | Details
4 1K9F 1 A alpha-D-glucuronidase 1422 3.2.1.131 | Details
5 1K9E 1 A alpha-D-glucuronidase 1422 3.2.1.131 | Details
6 1MQP 1 A alpha-D-glucuronidase 1422 3.2.1.131 | Details
7 1MQR 1 A ALPHA-D-GLUCURONIDASE 1422 3.2.1.131 | Details