Sequence Similarity Clusters for the Entities in PDB 1MQQ

Entity #1 | Chains: A
ALPHA-D-GLUCURONIDASE protein, length: 679 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28618
95 % 2 7 11367 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 2 7 11199
70 % 2 7 10614
50 % 2 7 9218
40 % 5 12 3668
30 % 5 12 3354

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1H41 1 A, B ALPHA-GLUCURONIDASE 155077 3.2.1.131 | Details
2 1GQI 1 A, B ALPHA-GLUCURONIDASE 155077 3.2.1.131 | Details
3 1L8N 1 A ALPHA-D-GLUCURONIDASE 1422 3.2.1.131 | Details
4 1GQL 1 A, B ALPHA-D-GLUCURONIDASE 155077 3.2.1.131 | Details
5 1MQQ 1 A ALPHA-D-GLUCURONIDASE 1422 3.2.1.131 | Details
6 1K9D 1 A alpha-D-glucuronidase 1422 3.2.1.131 | Details
7 1K9F 1 A alpha-D-glucuronidase 1422 3.2.1.131 | Details
8 1GQK 1 A, B ALPHA-D-GLUCURONIDASE 155077 3.2.1.131 | Details
9 1GQJ 1 A, B ALPHA-D-GLUCURONIDASE 155077 3.2.1.131 | Details
10 1K9E 1 A alpha-D-glucuronidase 1422 3.2.1.131 | Details
11 1MQP 1 A alpha-D-glucuronidase 1422 3.2.1.131 | Details
12 1MQR 1 A ALPHA-D-GLUCURONIDASE 1422 3.2.1.131 | Details