Sequence Similarity Clusters for the Entities in PDB 1MQN

Entity #1 | Chains: A,D,G
Hemagglutinin HA1 chain protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 6654
95 % 31 37 324
90 % 31 37 346
70 % 45 54 268
50 % 47 56 291
40 % 257 276 18
30 % 263 282 29
Entity #2 | Chains: B,E,H
Hemagglutinin HA2 chain protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 6802
95 % 3 3 7336
90 % 3 3 7300
70 % 3 3 7086
50 % 4 5 3994
40 % 4 5 3824
30 % 4 5 3525

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.