Sequence Similarity Clusters for the Entities in PDB 1MQM

Entity #1 | Chains: A,D,G
Hemagglutinin HA1 chain protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 6963
95 % 31 47 256
90 % 31 47 271
70 % 43 64 214
50 % 54 75 215
40 % 231 307 17
30 % 237 314 26
Entity #2 | Chains: B,E,H
Hemagglutinin HA2 chain protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 7116
95 % 1 3 7681
90 % 1 3 7639
70 % 1 3 7423
50 % 1 5 4157
40 % 1 5 3968
30 % 1 5 3655

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.