Sequence Similarity Clusters for the Entities in PDB 1MQL

Entity #1 | Chains: A,D,G
Hemagglutinin HA1 chain protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 6578
95 % 29 36 327
90 % 29 36 353
70 % 43 53 271
50 % 45 55 292
40 % 243 266 17
30 % 249 272 28
Entity #2 | Chains: B,E,H
Hemagglutinin HA2 chain protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 6728
95 % 2 3 7255
90 % 2 3 7220
70 % 2 3 7015
50 % 3 5 3968
40 % 3 5 3796
30 % 3 5 3507

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.