Sequence Similarity Clusters for the Entities in PDB 1MQD

Entity #1 | Chains: A,B,C,D
Glutamate receptor subunit 2 protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 73 109
95 % 14 156 61 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.0
PDBFlex
90 % 15 179 61
70 % 15 179 70
50 % 24 271 33
40 % 24 272 44
30 % 32 288 53

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.