Sequence Similarity Clusters for the Entities in PDB 1MQ8

Entity #1 | Chains: A,C
intercellular adhesion molecule-1 protein, length: 291 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 33788
95 % 1 1 26440
90 % 1 1 25553
70 % 1 1 23207
50 % 1 1 19984
40 % 1 1 17635
30 % 1 1 14972
Entity #2 | Chains: B,D
Integrin alpha-L protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 25877
95 % 27 29 681
90 % 27 29 713
70 % 27 29 755
50 % 27 29 807
40 % 27 29 832
30 % 51 54 491

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.