Sequence Similarity Clusters for the Entities in PDB 1MQ8

Entity #1 | Chains: A,C
intercellular adhesion molecule-1 protein, length: 291 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 34701
95 % 1 1 27164
90 % 1 1 26245
70 % 1 1 23818
50 % 1 1 20499
40 % 1 1 18088
30 % 1 1 15381
Entity #2 | Chains: B,D
Integrin alpha-L protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26571
95 % 27 29 746
90 % 27 29 776
70 % 27 29 818
50 % 27 29 862
40 % 27 29 884
30 % 51 54 514

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.