1MQ6

Crystal Structure of 3-chloro-N-[4-chloro-2-[[(5-chloro-2-pyridinyl)amino]carbonyl]-6-methoxyphenyl]-4-[[(4,5-dihydro-2-oxazolyl)methylamino]methyl]-2-thiophenecarboxamide Complexed with Human Factor Xa


Sequence Similarity Clusters for the Entities in PDB 1MQ6

Entity #1 | Chains: A
COAGULATION FACTOR X HEAVY CHAIN protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 60 136 215
95 % 60 136 273 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 60 136 285
70 % 60 137 329
50 % 556 712 14
40 % 1286 1897 4
30 % 1293 1911 7
Entity #2 | Chains: L
COAGULATION FACTOR X LIGHT CHAIN protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 33 68 573
95 % 33 68 716 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 33 68 745
70 % 33 68 792
50 % 33 69 825
40 % 68 120 502
30 % 99 154 400

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2Y5F 2 L FACTOR X LIGHT CHAIN RESIDUES 127-180 9606 3.4.21.6 | Details
2 2Y5G 2 L FACTOR X LIGHT CHAIN RESIDUES 127-180 9606 3.4.21.6 | Details
3 2JKH 2 L FACTOR X LIGHT CHAIN EGF2, RESIDUES 126-180 9606 3.4.21.6 | Details
4 2Y5H 2 L FACTOR X LIGHT CHAIN RESIDUES 127-180 9606 3.4.21.6 | Details
5 3KL6 2 B Coagulation Factor X light chain Factor X light chain residues 126-179 9606 3.4.21.6 | Details
6 3FFG 2 L Coagulation factor X, light chain sequence database residues 127-178 9606 3.4.21.6 | Details
7 2VWO 2 L FACTOR X LIGHT CHAIN EGF2, RESIDUES 126-180 9606 3.4.21.6 | Details
8 2VWN 2 L FACTOR X LIGHT CHAIN EGF2, RESIDUES 126-180 9606 3.4.21.6 | Details
9 2P3U 1 A Coagulation factor X EGF-like 2 domain 9606 3.4.21.6 | Details
10 2PR3 2 B COAGULATION FACTOR X, LIGHT CHAIN LIGHT CHAIN 9606 3.4.21.6 | Details
11 2XBV 2 L FACTOR X LIGHT CHAIN LIGHTCHAIN, RESIDUES 126-180 9606 3.4.21.6 | Details
12 2BOK 2 L COAGULATION FACTOR X EGF2 DOMAIN, RESIDUES 126-180 9606 3.4.21.6 | Details
13 2XC5 2 L FACTOR X LIGHT CHAIN LIGHTCHAIN, RESIDUES 126-180 9606 3.4.21.6 | Details
14 2XC4 2 L FACTOR X LIGHT CHAIN LIGHT CHAIN, RESIDUES 126-180 9606 3.4.21.6 | Details
15 2XBW 2 L FACTOR X LIGHT CHAIN LIGHT CHAIN, RESIDUES 126-180 9606 3.4.21.6 | Details
16 2VVV 2 L FACTOR X LIGHT CHAIN EGF2, RESIDUES 126-180 9606 3.4.21.6 | Details
17 3CEN 2 L COAGULATION FACTOR X, LIGHT CHAIN UNP residues 127-178 9606 3.4.21.6 | Details
18 2VWL 2 L FACTOR X LIGHT CHAIN EGF2, RESIDUES 126-180 9606 3.4.21.6 | Details
19 3IIT 2 B Factor X light chain UNP RESIDUES 125-178 9606 3.4.21.6 | Details
20 3TK6 2 B Factor X light chain UNP RESIDUES 125-178 9606 3.4.21.6 | Details
21 2XBX 2 L FACTOR X LIGHT CHAIN LIGHTCHAIN, RESIDUES 126-180 9606 3.4.21.6 | Details
22 1Z6E 2 L Coagulation factor X UNP residues 127-178 9606 3.4.21.6 | Details
23 2P3T 1 A Coagulation factor X EGF-like 2 domain 9606 3.4.21.6 | Details
24 1FJS 2 L COAGULATION FACTOR XA LIGHT CHAIN, EPIDERMAL GROWTH FACTOR LIKE DOMAIN 9606 3.4.21.6 | Details
25 2VVC 2 K, L FACTOR X LIGHT CHAIN EGF2, RESIDUES 126-180 9606 3.4.21.6 | Details
26 2VWM 2 K, L FACTOR X LIGHT CHAIN EGF2, RESIDUES 126-180 9606 3.4.21.6 | Details
27 2W3I 2 B COAGULATION FACTOR X, LIGHT CHAIN LIGHT CHAIN, RESIDUES 128-178 9606 3.4.21.6 | Details
28 2XC0 2 L FACTOR X LIGHT CHAIN LIGHTCHAIN, RESIDUES 126-180 9606 3.4.21.6 | Details
29 3Q3K 2 B Factor X light chain UNP RESIDUES 125-178 9606 3.4.21.6 | Details
30 3M37 2 L Coagulation factor X UNP residues 127-178 9606 3.4.21.6 | Details
31 2Q1J 2 B Factor X light chain (EC 3.4.21.6) Residues 128-178 9606 3.4.21.6 | Details
32 1HCG 2 B BLOOD COAGULATION FACTOR XA 9606 3.4.21.6 | Details
33 1MQ6 2 L COAGULATION FACTOR X LIGHT CHAIN EPIDERMAL GROWTH FACTOR LIKE DOMAIN 2 9606 3.4.21.6 | Details
34 5VOE 2 L Coagulation factor X residues 128-178 9606 3.4.21.6 | Details
35 2XBY 2 L FACTOR X LIGHT CHAIN LIGHT CHAIN, RESIDUES 126-180 9606 3.4.21.6 | Details
36 1MQ5 2 L COAGULATION FACTOR X LIGHT CHAIN EPIDERMAL GROWTH FACTOR LIKE DOMAIN 2 9606 3.4.21.6 | Details
37 2W3K 2 B COAGULATION FACTOR X, LIGHT CHAIN LIGHT CHAIN, RESIDUES 128-178 9606 3.4.21.6 | Details
38 2P93 2 L Factor Xa Residues 87-138 9606 3.4.21.6 | Details
39 2EI8 2 B Coagulation factor X, light chain RESIDUES 85-138 9606 3.4.21.6 | Details
40 3KQC 2 L factor Xa light chain residues 127-178 of factor X uncleaved sequence 9606 3.4.21.6 | Details
41 2D1J 2 B Coagulation factor X, light chain RESIDUES 85-138 9606 3.4.21.6 | Details
42 2W26 2 B ACTIVATED FACTOR XA HEAVY CHAIN RESIDUES 129-177 9606 3.4.21.6 | Details
43 1V3X 2 B Coagulation factor X, LIGHT CHAIN Residues 87-138 9606 3.4.21.6 | Details
44 2P94 2 L Factor Xa Residues 87-138 9606 3.4.21.6 | Details
45 3KQB 2 L factor Xa light chain residues 127-178 of factor X uncleaved sequence 9606 3.4.21.6 | Details
46 3TK5 2 B Factor X light chain UNP RESIDUES 125-178 9606 3.4.21.6 | Details
47 5K0H 2 B Coagulation factor X 9606 3.4.21.6 | Details
48 3M36 2 L Coagulation factor X UNP residues 127-178 9606 3.4.21.6 | Details
49 2BQ7 1 A COAGULATION FACTOR X DES-GLA LIGHT CHAIN, RESIDUES 126-177 9606 3.4.21.6 | Details
50 3KQE 2 L factor Xa light chain residues 127-178 of factor X uncleaved sequence 9606 3.4.21.6 | Details
51 2EI6 2 B Coagulation factor X, light chain RESIDUES 85-138 9606 3.4.21.6 | Details
52 3CS7 2 L Coagulation factor X Coagulation Factor X, Light Chain 9606 3.4.21.6 | Details
53 3LIW 2 B Factor X light chain UNP RESIDUES 128-178 9606 3.4.21.6 | Details
54 2EI7 2 B Coagulation factor X, light chain RESIDUES 85-138 9606 3.4.21.6 | Details
55 5VOF 2 L Coagulation factor X residues 128-178 9606 3.4.21.6 | Details
56 2VVU 2 L FACTOR X LIGHT CHAIN EGF2, RESIDUES 126-180 9606 3.4.21.6 | Details
57 2P95 2 L Factor Xa Residues 87-138 9606 3.4.21.6 | Details
58 2G00 2 L Coagulation factor X PROTEOLYTIC CLEAVAGE PRODUCT Coagulation Factor X, Light Chain 9606 3.4.21.6 | Details
59 2P16 2 L Coagulation factor X (EC 3.4.21.6) (Stuart factor) (Stuart-Prower factor) Coagulation Factor X, Light Chain 9606 3.4.21.6 | Details
60 2FZZ 2 L Coagulation factor X PROTEOLYTIC CLEAVAGE PRODUCT Coagulation Factor X, Light Chain 9606 3.4.21.6 | Details
61 2RA0 2 L Coagulation factor X light chain, UNP residues 128-178 9606 3.4.21.6 | Details
62 2BMG 1 A COAGULATION FACTOR X LIGHT CHAIN, RESIDUES 126-178 9606 3.4.21.6 | Details
63 2PHB 2 B Coagulation factor X, light chain light chain 9606 3.4.21.6 | Details
64 3KQD 2 L factor Xa light chain residues 127-178 of factor X uncleaved sequence 9606 3.4.21.6 | Details
65 2BQW 1 A COAGULATION FACTOR X DES-GLA LIGHT CHAIN, RESIDUES 126-177 9606 3.4.21.6 | Details
66 2P3F 2 L Coagulation factor X EGF-like 2 domain 9606 3.4.21.6 | Details
67 2BQ6 1 A COAGULATION FACTOR X DES-GLA LIGHT CHAIN, RESIDUES 126-177 9606 3.4.21.6 | Details
68 2GD4 1 A, L Coagulation factor X, Stuart factor, Stuart-Prower factor, Contains: Factor X light chain; Factor X heavy chain; Activated factor Xa heavy chain Residues 126-182 9606 3.4.21.6 | Details