1MQ6

Crystal Structure of 3-chloro-N-[4-chloro-2-[[(5-chloro-2-pyridinyl)amino]carbonyl]-6-methoxyphenyl]-4-[[(4,5-dihydro-2-oxazolyl)methylamino]methyl]-2-thiophenecarboxamide Complexed with Human Factor Xa


Sequence Similarity Clusters for the Entities in PDB 1MQ6

Entity #1 | Chains: A
COAGULATION FACTOR X HEAVY CHAIN protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 48 119 251
95 % 60 136 284 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 60 136 300
70 % 60 137 339
50 % 60 137 411
40 % 162 289 176
30 % 1304 1915 5
Entity #2 | Chains: L
COAGULATION FACTOR X LIGHT CHAIN protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 33 67 563
95 % 33 68 763 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 33 68 795
70 % 33 68 838
50 % 34 69 877
40 % 34 69 916
30 % 34 69 958

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures