1MQ6

Crystal Structure of 3-chloro-N-[4-chloro-2-[[(5-chloro-2-pyridinyl)amino]carbonyl]-6-methoxyphenyl]-4-[[(4,5-dihydro-2-oxazolyl)methylamino]methyl]-2-thiophenecarboxamide Complexed with Human Factor Xa


Sequence Similarity Clusters for the Entities in PDB 1MQ6

Entity #1 | Chains: A
COAGULATION FACTOR X HEAVY CHAIN protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 60 136 222
95 % 60 136 282 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 60 136 294
70 % 60 137 338
50 % 558 714 16
40 % 1298 1912 4
30 % 1305 1926 7
Entity #2 | Chains: L
COAGULATION FACTOR X LIGHT CHAIN protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 33 68 606
95 % 33 68 745 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 33 68 779
70 % 33 68 820
50 % 33 69 857
40 % 68 120 520
30 % 99 154 414

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures