1MQ6

Crystal Structure of 3-chloro-N-[4-chloro-2-[[(5-chloro-2-pyridinyl)amino]carbonyl]-6-methoxyphenyl]-4-[[(4,5-dihydro-2-oxazolyl)methylamino]methyl]-2-thiophenecarboxamide Complexed with Human Factor Xa


Sequence Similarity Clusters for the Entities in PDB 1MQ6

Entity #1 | Chains: A
COAGULATION FACTOR X HEAVY CHAIN protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 48 119 219
95 % 60 134 260 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 60 134 274
70 % 60 135 311
50 % 550 698 14
40 % 1184 1720 4
30 % 1273 1870 6
Entity #2 | Chains: L
COAGULATION FACTOR X LIGHT CHAIN protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 33 66 517
95 % 33 66 708 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 33 66 738
70 % 33 66 781
50 % 33 67 819
40 % 68 118 473
30 % 68 118 466

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures