Sequence Similarity Clusters for the Entities in PDB 1MPS

Entity #1 | Chains: L
PHOTOSYNTHETIC REACTION CENTER protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 68 372
95 % 38 96 322
90 % 38 96 348
70 % 38 96 388
50 % 53 120 334
40 % 53 120 365
30 % 53 120 366
Entity #2 | Chains: M
PHOTOSYNTHETIC REACTION CENTER protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51965
95 % 38 96 321
90 % 38 96 346
70 % 38 96 387
50 % 53 120 333
40 % 53 120 364
30 % 53 120 365
Entity #3 | Chains: H
PHOTOSYNTHETIC REACTION CENTER protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 95 231
95 % 38 96 324
90 % 38 96 349
70 % 38 96 389
50 % 38 96 455
40 % 53 120 366
30 % 53 120 367

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.