Sequence Similarity Clusters for the Entities in PDB 1MPM

Entity #1 | Chains: A,B,C
MALTOPORIN protein, length: 421 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 3344
95 % 2 6 3660 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 2 6 3728
70 % 4 8 2660
50 % 4 8 2639
40 % 4 8 2584
30 % 4 8 2415

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2MPR 1 A, B, C MALTOPORIN MATURE PROTEIN, SIGNAL SEQUENCE CLEAVED OFF 90371
2 1AF6 1 A, B, C MALTOPORIN 562
3 1MPR 1 A, B, C MALTOPORIN 90371
4 1MPM 1 A, B, C MALTOPORIN 562
5 1MPO 1 A, B, C MALTOPORIN 562
6 1MPQ 1 A, B, C MALTOPORIN 562
7 1MAL 1 A, B, C MALTOPORIN 562
8 1MPN 1 A, B, C MALTOPORIN 562