Sequence Similarity Clusters for the Entities in PDB 1MPL

Entity #1 | Chains: A
D-alanyl-D-alanine carboxypeptidase protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 15 4378
95 % 5 15 4718 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 5 15 4756
70 % 5 15 4645
50 % 5 15 4446
40 % 5 15 4210
30 % 5 20 1530

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures