Sequence Similarity Clusters for the Entities in PDB 1MPJ

Entity #1 | Chains: A,C
PHENOL INSULIN protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 156 246 5
95 % 183 288 7 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 185 292 8
70 % 185 292 13
50 % 185 292 17
40 % 185 292 28
30 % 185 292 47
Entity #2 | Chains: B,D
PHENOL INSULIN protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 162 218 7
95 % 186 285 9 Flexibility: Medium
Max RMSD: 6.8, Avg RMSD: 3.5
PDBFlex
90 % 188 291 9
70 % 188 294 14
50 % 188 294 18
40 % 188 294 30
30 % 188 294 48

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures