Sequence Similarity Clusters for the Entities in PDB 1MPJ

Entity #1 | Chains: A,C
PHENOL INSULIN protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 185 290 6
95 % 186 296 8 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 187 298 10
70 % 191 304 12
50 % 191 304 16
40 % 191 304 29
30 % 191 304 46
Entity #2 | Chains: B,D
PHENOL INSULIN protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 183 266 7
95 % 194 303 7 Flexibility: Medium
Max RMSD: 6.8, Avg RMSD: 3.5
PDBFlex
90 % 194 303 8
70 % 194 306 13
50 % 194 306 17
40 % 194 306 30
30 % 194 306 47

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures